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Today we’re sharing an update on Claude’s protein design capabilities.
Working with Adaptyv Bio and Twist Bioscience, Claude designed de novo protein binders against 14 of 15 targets. With a 30k token prompt written by a human expert, Claude achieved hit rates up to 28.2% when argets simultaneously over 48 hours, with no human intervention or steering. When designing against a single target in a 24 hour campaign, Claude achieved an overall hit rate of 35%.
We included all targets in Adaptyv’s BenchBB, and novel targets 15-PGDH and GDF-8. Claude performs at or beyond the level of the top competition participants in both hit rate and binding affinity.
Working with Adaptyv Bio and Twist Bioscience, Claude designed de novo protein binders against 14 of 15 targets. With a 30k token prompt written by a human expert, Claude achieved hit rates up to 28.2% when argets simultaneously over 48 hours, with no human intervention or steering. When designing against a single target in a 24 hour campaign, Claude achieved an overall hit rate of 35%.
We included all targets in Adaptyv’s BenchBB, and novel targets 15-PGDH and GDF-8. Claude performs at or beyond the level of the top competition participants in both hit rate and binding affinity.
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Nathan C. Frey retweeted
Can we track how the virus is spreading in the Ebola outbreak in DR Congo? Claude Science is providing bioinformatics support to scientists at @inrb_kinshasa responding to one of the most pressing global health challenges right now:
virological.org/t/reproduction…
Drs. Placide Mbala Bokalanga, Collins K. Tanui, Emmanuel Lokilo, Princesse Paku, their team, and I used Claude Science to analyze >800 virus genomes and infer the most likely ‘virus family tree’ to reveal when the outbreak started, how and where the virus is spreading, and whether spread is increasing or slowing.
Claude Science enables researchers to run complex bioinformatics workflows, including Bayesian phylodynamic inference, and go from sequences to public health insights in minutes (or hours for BEAST X analyses). It also allowed us to compare how stable the results are across >20 different phylodynamic workflows and data subsets, and easily rerun analyses as new data comes in: our current report shows results for genomes released up to last Saturday.
Our results are further corroborated by this preprint, posted one day after the initial Claude Science results, which independently estimated the viral effective population size for genomes collected through mid-August and finds the same early growth rate and slowdown since June: medrxiv.org/content/10.648…
virological.org/t/reproduction…
Drs. Placide Mbala Bokalanga, Collins K. Tanui, Emmanuel Lokilo, Princesse Paku, their team, and I used Claude Science to analyze >800 virus genomes and infer the most likely ‘virus family tree’ to reveal when the outbreak started, how and where the virus is spreading, and whether spread is increasing or slowing.
Claude Science enables researchers to run complex bioinformatics workflows, including Bayesian phylodynamic inference, and go from sequences to public health insights in minutes (or hours for BEAST X analyses). It also allowed us to compare how stable the results are across >20 different phylodynamic workflows and data subsets, and easily rerun analyses as new data comes in: our current report shows results for genomes released up to last Saturday.
Our results are further corroborated by this preprint, posted one day after the initial Claude Science results, which independently estimated the viral effective population size for genomes collected through mid-August and finds the same early growth rate and slowdown since June: medrxiv.org/content/10.648…
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Today, we’re announcing an open call for guest investigators in life sciences. Over 8–12 weeks, guest investigators will work directly with my team and other Anthropic researchers to produce analyses and tools for their work. We’ll run our models and harnesses, at no cost to them. We’ll work together to open-source the resulting data, artifacts, and code, and write preprints about what we find.
We want humans to remain at the center of scientific discovery, deciding what questions to pursue, and how to pursue them. Those decisions are not ours to make alone. This open call is part of our ongoing efforts at Anthropic to support researchers and accelerate scientific discovery.
I’m looking for principal investigators and their research groups at academic institutions, nonprofits, or government labs, working in causal human biology, structural and computational molecular biology, medicinal chemistry, drug discovery, and clinical science.
Applications are open for about 14 days: anthropic.com/news/open-call…
We want humans to remain at the center of scientific discovery, deciding what questions to pursue, and how to pursue them. Those decisions are not ours to make alone. This open call is part of our ongoing efforts at Anthropic to support researchers and accelerate scientific discovery.
I’m looking for principal investigators and their research groups at academic institutions, nonprofits, or government labs, working in causal human biology, structural and computational molecular biology, medicinal chemistry, drug discovery, and clinical science.
Applications are open for about 14 days: anthropic.com/news/open-call…
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Nathan C. Frey retweeted
We’re opening a research preview of Claude Duet, a new app where Claude works as a proactive agent.
It comes to you with what needs your attention, completes tasks you ask of it, keeps working when you step away, and checks with you before it acts on your behalf.
It comes to you with what needs your attention, completes tasks you ask of it, keeps working when you step away, and checks with you before it acts on your behalf.
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Where do you go next after reporting from the Strait of Hormuz? For the past three months, Citrini Research, an independent research firm, has been working with our team and an internal research model to see if they could use AI to create a new drug. What follows is an entertaining, candid, and humbling account of a group of motivated nonexperts (or “filthy casuals”, as Citrini would say) trying to tackle a real problem in human health with Claude.
We landed on scorpion neurotoxins, which kill over 3,000 people a year. Of the 211 designs we produced and tested, 17 met our criteria for a binder. None of the designs bound more than one toxin and none have been tested for neutralizing a toxin.
One of my favorite quotes from the piece is: “Our virtual biologist may have compressed a year's worth of work into a couple days, but biology works at the speed of life…Over two days, we watched Claude work through problems at a speed that was difficult to comprehend. For the next two months, we spent much of the time becoming familiar with laboratory turnaround times (This mostly involved sending memes in Slack).”
We landed on scorpion neurotoxins, which kill over 3,000 people a year. Of the 211 designs we produced and tested, 17 met our criteria for a binder. None of the designs bound more than one toxin and none have been tested for neutralizing a toxin.
One of my favorite quotes from the piece is: “Our virtual biologist may have compressed a year's worth of work into a couple days, but biology works at the speed of life…Over two days, we watched Claude work through problems at a speed that was difficult to comprehend. For the next two months, we spent much of the time becoming familiar with laboratory turnaround times (This mostly involved sending memes in Slack).”
What is AI really capable of in bio?
To separate hype from reality, we spent 3 months working firsthand with @AnthropicAI's internal research model to see if it could create an experimental scorpion antivenom.
Introducing Citrini Therapeutics.
citriniresearch.com/p/citrini-ther…
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Nathan C. Frey retweeted
We’re committing a portion of Anthropic’s shares to the Anthropic Public Benefit Fund, a new wholly owned entity dedicated entirely to the public benefit.
It will start off with 5% of our shares. For every 50% increase in the company’s value over a set baseline, we can contribute up to an extra 2%, subject to our board’s discretion.
In total, this means that roughly 20% of Anthropic’s shares are committed to the public good. Our co-founders have already pledged to donate 80% of their equity, and around half our employees are donating a portion of their equity as part of a donation matching program we’ve run since our founding.
In the post below, we share more details about our new fund.
anthropic.com/news/public-be…
It will start off with 5% of our shares. For every 50% increase in the company’s value over a set baseline, we can contribute up to an extra 2%, subject to our board’s discretion.
In total, this means that roughly 20% of Anthropic’s shares are committed to the public good. Our co-founders have already pledged to donate 80% of their equity, and around half our employees are donating a portion of their equity as part of a donation matching program we’ve run since our founding.
In the post below, we share more details about our new fund.
anthropic.com/news/public-be…
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Join us for four months at Anthropic as a STEM fellow. You'll work directly with our research team on ambitious, open-ended problems in your field of expertise.
I encourage you to apply even if you don't think you meet every single qualification.
job-boards.greenhouse.io/anthropic/jobs…
I encourage you to apply even if you don't think you meet every single qualification.
job-boards.greenhouse.io/anthropic/jobs…
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Nathan C. Frey retweeted
GLP-1R is a target we've all heard of. Designing binders against GPCRs is challenging. Agonizing them is next level. Challenge 3 in our competition requires both.
We're also extending the duration of each challenge to two weeks, including for Challenge 2: TNFα
Good luck!
We're also extending the duration of each challenge to two weeks, including for Challenge 2: TNFα
Good luck!
Challenge 3 of the Anthropic × Adaptyv Protein Design Competition is open. You have to design a protein that switches on GLP1R, the receptor that semaglutide (Ozempic, Wegovy) and tirzepatide act on in type 2 diabetes and obesity.
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"Our experiments suggest that small AI models may be months away from being capable enough to self-replicate on commercial IoT devices, like smart ovens and off-brand Android TV boxes. A replicator like this would be challenging to shut down, since there’s no centralized point to shut off - though it may be slow (with a doubling time of days)...Models of 30B parameters and under can already complete many of the individual steps for replication today, though they make mistakes when composing them end to end. In our simplified evals, GLM-5.2 and stronger models are capable of end to end replication. If small models improve at their historical rate, they’ll match this capability level by the end of this year."
anthropic.com/research/self-…
anthropic.com/research/self-…
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We're committing $150M to the Genesis Mission to support American scientific research. The funding will help get Claude to more than 15 agencies, including NASA, NIH, NSF, and to scientists across the national labs.
anthropic.com/news/genesis-m…
anthropic.com/news/genesis-m…
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Nathan C. Frey retweeted
TNFα is the target for our second challenge! This target is tough on its own for binder design and the pH requirement ups the difficulty even more. Good luck to all participants!
Announcing Challenge 2 of the Anthropic x Adaptyv Protein Design Competition!
Humira, the best-selling drug ever, blocks TNF-α, an inflammation marker protein that’s overexpressed in rheumatoid arthritis and Crohn’s disease. In this challenge, the goal is to make a better binder eases selectively at pH 6.0 in the endosome of cells to improve drug half-life.
The protein must also bind both human and mouse TNF-α, making it easier to test the same design in preclinical models.
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Here is our first protein design challenge! We're ramping up the difficulty by asking for cross-reactivity and pH-dependence for selective binding in the tumor microenvironment. This is a step towards demonstrating more therapeutically relevant capabilities.
Our role, in partnership with Adaptyv, is to provide lots of Claude, compute, and budget to test designs in the lab, so the best protein designers in the world can go after this problem with their favorite models.
Our role, in partnership with Adaptyv, is to provide lots of Claude, compute, and budget to test designs in the lab, so the best protein designers in the world can go after this problem with their favorite models.
We're excited to be unveiling the first challenge in our protein design competition! EGFR is the target from the first competition, but we're asking for much more this time: a mouse cross-reactive binder that conditionally binds at acidic pH but not neutral pH. This problem is at capabilities, but I'm confident that the world's leading designers, equipped with a ton of tokens and compute, and over 1,000 designs screened in the lab will be able to solve it.
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Nathan C. Frey retweeted
We're launching Challenge 1 of the Anthropic x Adaptyv Protein Design Competition on @proteinbase: design a conditional binder to EGFR, a key cancer target.
The goal: bind EGFR under the acidic conditions of the tumor environment, but not at the normal pH around healthy cells. must bind to both the human and the mouse variant of EGFR to support easier preclinical testing
The goal: bind EGFR under the acidic conditions of the tumor environment, but not at the normal pH around healthy cells. must bind to both the human and the mouse variant of EGFR to support easier preclinical testing
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Nathan C. Frey retweeted
New on the Science Blog: Yes, Claude can do Nine Loops.
Theoretical physicists predict how particles behave using formulas called scattering amplitudes. These are notoriously hard to compute, so researchers work with layers of increasingly fine corrections called “loops”—each added loop makes the answer more precise but takes exponentially more computation. Most calculations stop at two or three loops. Eight loops was the previous record in a simplified model physicists use as a testing ground (planar N=4 super-Yang-Mills), set by SLAC's Lance Dixon and collaborators.
Last month, physicist and science writer @4gravitons issued a challenge: could an AI push past eight loops in this model, using only the compute budget an academic could reasonably access?
Given a single prompt describing the nine-loop problem, Claude ran largely unsupervised for days in Claude Science and solved it using methods developed by Dixon and his colleagues, at a total cost of a few thousand dollars. Dixon independently verified the result, and von Hippel wrote about the experience for our blog.
Read more: anthropic.com/research/yes-c…
Theoretical physicists predict how particles behave using formulas called scattering amplitudes. These are notoriously hard to compute, so researchers work with layers of increasingly fine corrections called “loops”—each added loop makes the answer more precise but takes exponentially more computation. Most calculations stop at two or three loops. Eight loops was the previous record in a simplified model physicists use as a testing ground (planar N=4 super-Yang-Mills), set by SLAC's Lance Dixon and collaborators.
Last month, physicist and science writer @4gravitons issued a challenge: could an AI push past eight loops in this model, using only the compute budget an academic could reasonably access?
Given a single prompt describing the nine-loop problem, Claude ran largely unsupervised for days in Claude Science and solved it using methods developed by Dixon and his colleagues, at a total cost of a few thousand dollars. Dixon independently verified the result, and von Hippel wrote about the experience for our blog.
Read more: anthropic.com/research/yes-c…
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Claude Opus 5.5 dreams of biology.
Claude made this with 30 lines of JavaScript on an HTML canvas. no image models involved. it's all code.
Claude made this with 30 lines of JavaScript on an HTML canvas. no image models involved. it's all code.
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Nathan C. Frey retweeted
Today we announced the Claude-led discovery of a molecular machine that we suspect could represent a new gene editing mechanism. Its precise function, biotechnological utility (if any), or level of significance is not yet clear, but at minimum it is work I would have been proud to do as a PhD student. The work was done mostly, though not entirely, by Claude: our life sciences team suggested a broad area of research, Claude read through the literature and a bunch of genome data and discovered something interesting, then Claude proposed experiments to verify the discovery and our team carried them out.
It’s easy to dismiss this as a one-off or curiosity, but we’ve repeatedly seen a pattern where AI performance in new intellectual domains goes from weak to superhuman in a matter of a few years. In 2023 models struggled to do math at the level of an average high-school student. In 2024 they started to do well on math competitions for the best high-schoolers in the country, in 2025 they started to solve minor open problems, in early 2026 more significant open problems, and in late 2026 they are beginning to solve the top few open problems in all of mathematics. We believe AI for biology is on a similar exponential trend.
The main difference between biology and mathematics, of course, is that math can be done purely theoretically, while biology requires experimentation. Some have used this to draw the conclusion that AI’s utility in biology will be limited. We think this is wrong. As we’ve demonstrated today, humans can collaborate with AI to perform the experiments, validate key results in a few weeks and, if necessary, work with the AI to iterate on what they find. Eventually it may even be possible for Claude itself to safely perform the experiments by autonomously controlling lab equipment, with appropriate safeguards in place, but we aren’t doing that today (our lab is also a BSL1/BSL2 facility that doesn't handle materials dangerous to humans).
More broadly, biomedical advancement has many stages — from fundamental biology discoveries, to translational research, to drug discovery, clinical trials, and finally the actual delivery of medicines and health care to patients. We are also interested in these later stages, but even simply accelerating the first stage of fundamental biological discoveries has the potential to speed up and broaden the entire pipeline. Improving our understanding of biology and sharpening biologists’ tools can drive forward all of the later stages, for example by identifying new drug targets, finding new therapeutic modalities, allowing for more precise measurement, and speeding up the experimental loop which itself further accelerates our understanding of biology. This will not in itself speed up clinical trial times, but if it succeeds it could greatly increase the number of promising candidates that go into the pipeline — an increase in throughput even though latency remains.
In Machines of Loving Grace, I wrote about AI’s potential to “cure most diseases in 5-10 years” — a goal that sounds impossible, but one I believe is just barely possible if AI is applied to every stage of the pipeline. The first step is showing that AI can first help with, and then drive, biological discoveries.
Claude’s discovery is the latest in a line of related prior work that goes back decades, beginning with systems like CRISPR, and continuing with discoveries like the bridge recombinase and VIPR in the past few years. Recently, there has been heightened interest in systems based on reverse transcriptase (RT) enzymes, the enzyme underlying the system Claude identified. And most recently, a Stanford team working independently described a novel RT system with an associated non-coding array that is in some ways similar to the one Claude found, though they are distinct systems that evolved independently from each other. I believe that we’re at the very beginning of finding such systems and developing them into powerful tools for biotechnology.
I’m proud of the resources Anthropic has invested in accelerating the public benefits of AI through the life sciences, and we’re aiming both to grow our life sciences team and to work with other scientists to extend this approach to a broad range of problems. If you have a proposal for a research collaboration or are interested in joining our life sciences team, please reach out.
It’s easy to dismiss this as a one-off or curiosity, but we’ve repeatedly seen a pattern where AI performance in new intellectual domains goes from weak to superhuman in a matter of a few years. In 2023 models struggled to do math at the level of an average high-school student. In 2024 they started to do well on math competitions for the best high-schoolers in the country, in 2025 they started to solve minor open problems, in early 2026 more significant open problems, and in late 2026 they are beginning to solve the top few open problems in all of mathematics. We believe AI for biology is on a similar exponential trend.
The main difference between biology and mathematics, of course, is that math can be done purely theoretically, while biology requires experimentation. Some have used this to draw the conclusion that AI’s utility in biology will be limited. We think this is wrong. As we’ve demonstrated today, humans can collaborate with AI to perform the experiments, validate key results in a few weeks and, if necessary, work with the AI to iterate on what they find. Eventually it may even be possible for Claude itself to safely perform the experiments by autonomously controlling lab equipment, with appropriate safeguards in place, but we aren’t doing that today (our lab is also a BSL1/BSL2 facility that doesn't handle materials dangerous to humans).
More broadly, biomedical advancement has many stages — from fundamental biology discoveries, to translational research, to drug discovery, clinical trials, and finally the actual delivery of medicines and health care to patients. We are also interested in these later stages, but even simply accelerating the first stage of fundamental biological discoveries has the potential to speed up and broaden the entire pipeline. Improving our understanding of biology and sharpening biologists’ tools can drive forward all of the later stages, for example by identifying new drug targets, finding new therapeutic modalities, allowing for more precise measurement, and speeding up the experimental loop which itself further accelerates our understanding of biology. This will not in itself speed up clinical trial times, but if it succeeds it could greatly increase the number of promising candidates that go into the pipeline — an increase in throughput even though latency remains.
In Machines of Loving Grace, I wrote about AI’s potential to “cure most diseases in 5-10 years” — a goal that sounds impossible, but one I believe is just barely possible if AI is applied to every stage of the pipeline. The first step is showing that AI can first help with, and then drive, biological discoveries.
Claude’s discovery is the latest in a line of related prior work that goes back decades, beginning with systems like CRISPR, and continuing with discoveries like the bridge recombinase and VIPR in the past few years. Recently, there has been heightened interest in systems based on reverse transcriptase (RT) enzymes, the enzyme underlying the system Claude identified. And most recently, a Stanford team working independently described a novel RT system with an associated non-coding array that is in some ways similar to the one Claude found, though they are distinct systems that evolved independently from each other. I believe that we’re at the very beginning of finding such systems and developing them into powerful tools for biotechnology.
I’m proud of the resources Anthropic has invested in accelerating the public benefits of AI through the life sciences, and we’re aiming both to grow our life sciences team and to work with other scientists to extend this approach to a broad range of problems. If you have a proposal for a research collaboration or are interested in joining our life sciences team, please reach out.
Claude has discovered a previously unknown enzyme system hidden in the DNA of bacteriophages. Beside the enzyme’s gene sits a long array of repeating DNA—a structure that looks somewhat similar to CRISPR.
We don’t yet understand what this system does, but only a handful of known systems share its features, and all of them are able to cut, copy, and paste DNA. Historically, the discovery of such programmable systems has helped revolutionize medicine. CRISPR, for instance, is now the foundation of genetic medicines. But it will take much more work to learn what this system does, and whether it can be put to similar use.
Read more: anthropic.com/news/claude-di…
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We’ve set up a molecular biology lab at Anthropic and we’re announcing our first discovery! Claude discovered a new CRISPR-like enzyme.
950 agents spent 21 hours searching through a database of DNA sequences until one of the agents found something striking: “[The DNA next to the RT] is spectacular: I can see by eye a tandem repeat array … that's a CRISPR-like … repeat array?!”.
After analysis and testing in our lab, we found that the sequence is a previously uncharacterized enzyme system. We don’t know what it does yet, but it has features reminiscent of CRISPR.
Our lab looks like a typical molecular biology lab. Our research only involves the lower-levels of biosafety risk level; we don’t handle pathogens that can infect humans, and all the lab work is performed by human scientists. We’re sharing these early findings with the community to show how Claude can be used to accelerate fundamental research in biology.
950 agents spent 21 hours searching through a database of DNA sequences until one of the agents found something striking: “[The DNA next to the RT] is spectacular: I can see by eye a tandem repeat array … that's a CRISPR-like … repeat array?!”.
After analysis and testing in our lab, we found that the sequence is a previously uncharacterized enzyme system. We don’t know what it does yet, but it has features reminiscent of CRISPR.
Our lab looks like a typical molecular biology lab. Our research only involves the lower-levels of biosafety risk level; we don’t handle pathogens that can infect humans, and all the lab work is performed by human scientists. We’re sharing these early findings with the community to show how Claude can be used to accelerate fundamental research in biology.
Claude has discovered a previously unknown enzyme system hidden in the DNA of bacteriophages. Beside the enzyme’s gene sits a long array of repeating DNA—a structure that looks somewhat similar to CRISPR.
We don’t yet understand what this system does, but only a handful of known systems share its features, and all of them are able to cut, copy, and paste DNA. Historically, the discovery of such programmable systems has helped revolutionize medicine. CRISPR, for instance, is now the foundation of genetic medicines. But it will take much more work to learn what this system does, and whether it can be put to similar use.
Read more: anthropic.com/news/claude-di…
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