Craig Russell retweeted
AI4Life Team@AI4LifeTeam
17 Jul 2023
Get ready for a game-changing development! AI4Life and @LeicaMicro have joined forces to integrate #DeepLearning models from @bioimageio into @AiviaSoftware. Industry-academia teamwork in action! 🔬🚀

ai4life.eurobioimaging.eu/ai4life-leica-…
Euro-BioImaging Industry Board@EBIB_imaging
17 Jul 2023
Did you know? @LeicaMicrosystem’s AIVIA software now integrates models from the BioImage.io, a public repository of FAIR, pre-trained AI Models developed within the @AI4LifeTeam project to reach a wider user community! #industrycollaborations
eurobioimaging-industryboard.com/ai4life-aivia/
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Craig Russell retweeted
Andrew York@AndrewGYork
12 Jul 2023
We discovered a surprisingly easy way to control the brightness of fluorescent proteins via magnetic fields:

andrewgyork.github.io/gfp_magnetoflu…

This raises fascinating scientific questions about the mechanism, and tantalizing technological opportunities for bioengineering.
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Craig Russell retweeted
Florian Jug@florianjug
15 Jun 2023
This year, the BioImage Computing (#BIC) workshop will go down at ICCV in Paris! 🥐

Submit your work between June 21st and July 21st and join us at ICCV!

Check out the preliminary program: bioimagecomputing.com/program/
Florian Jug@florianjug
24 Oct 2022
This years BioImage Computing (BIC) Workshop is going down today in Tel Aviv at @eccvconf.
bioimagecomputing.com

The show gets started by Alexander @sagzehn Krull… first invited speaker is David @davidvanvalen.

Lots of great talks to come! 🎉
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Craig Russell retweeted
Patricia Carvajal@canicamxli
26 May 2023
Day 5... Distributed/Cloud computing, and Advanced topics (Terminal, Snakemake, pyTorch)! Jean Marie Burel, @WalczyskoPetr and @microRussell join us on the last day of the 'Microscopy data analysis: machine learning and the @BioimageA' @EBItraining course. Thank you all!!
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Craig Russell retweeted
AI4Life Team@AI4LifeTeam
26 May 2023
Looking for an engaging Friday read? Check out the comprehensive report by @gomez_mariscal in @focalplane_jcs, highlighting AI4Life's active participation at the 5th @NEUBIAS_ Conference:

focalplane.biologists.com/2023/05/26/ai4…
AI4Life at the 5th NEUBIAS Conference Posted by Estibaliz Gómez-de-Mariscal, on 26 May 2023 AI4Life recently participated in the 5th NEUBIAS Conference in Porto, Portugal, a two-part event comprising the Defragmentation Training School and the Open Symposium. This conference brought together experts and enthusiasts in the field of BioImage Analysis (BIA) to explore cutting-edge techniques and advancements in the integration of cloud computing. Under the umbrella of AI4Life, there were significant contributions in various sessions and presentations during the conference showcasing the project’s expertise and involvement in the BIA community.
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Craig Russell retweeted
AI4Life Team@AI4LifeTeam
24 May 2023
Replying to @gomez_mariscal
@gomez_mariscal takes over from Dominik to perform #DeepLearning boosted instance #NucleiSegmentation with @deepImageJ and run superresolution models in @FijiSc, all of them available in @bioimageio 🦒
Integration of deep learning into bioimage analysis pipelines. It shows the interface of Fiji and the paper "MorphoLibJ: integrated library and plugins for mathematical morphology with ImageJ"Arrate Muñoz Barrutia, Daniel Sage, Estibaliz Gómez de Mariscal, Carlos Garcia-López-de-Haro and Wei Ouyang. It shows a screenshot of the paper "DeepImageJ: A user-friendly environment to run deep learning models in ImageJ"
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Craig Russell retweeted
AI4Life Team@AI4LifeTeam
24 May 2023
Dominik Kutra from @ilastik_team help trainees with #ImageSegmentation in ilastik, explore and discover the tools in the @bioimageio 🦒 and run the model zoo models in ilastik.
Ilastik workflows: Load data -> preprocess... The image shows examples of pixel classification, object classification, neural network classification, carving, boundary-based segmentation and trackingilastik - interactive machine-learning for everyone New machine learning algorithms: with less training data, with biological priors, for cutting-edge modalities
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Craig Russell retweeted
AI4Life Team@AI4LifeTeam
24 May 2023
And now comes the hands-on session! How to look for a model in @bioimageio to segment Bacillus Subtilis bacteria? Can the model be downloaded and run? @gomez_mariscal teaches all this and more!
Screenshot displaying a card in bioimage.io that shows a model to segment Bacillus Subtilis
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Craig Russell retweeted
Patricia Carvajal@canicamxli
25 May 2023
A special thanks to @EoscLife for the support given for the organisation of the 'Microscopy data analysis: machine learning and the @BioimageA' @EBItraining course, along with #BINASupport to our amazing delegates from @BioimagingNA. One more day to go!!
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Craig Russell retweeted
Wei OUYANG@imweio
15 Feb 2023
We are #hiring PhD students and Postdocs in #AI, #deeplearning #computationalbiology, #bioimaging, #robotics and #wholecellmodeling

I recently joined @KTHuniversity as an assistant professor and starting a new research group ( AICell Lab: aicell.io) at @scilifelab
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Craig Russell retweeted
EMBL-EBI Training@EBItraining
7 Feb 2023
Applications for our #microscopy virtual course, focusing on #machinelearning and the @BioimageA close this Sunday.

Submit yours now: ebi.ac.uk/training/event…

Run in association with @EoscLife
Funding available* from @BioimagingNA

*T&Cs apply.
EMBL-EBI virtual course. Microscopy data analysis: machine learning and the BioImage Archive. 22 - 26 May 2023. EOSC-Life and EMBL-EBI logos.
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Craig Russell retweeted
Florian Jug@florianjug
21 Nov 2022
🚨Job Alert 🚨

We are looking for a #BioimageAnalyst and/or #RSE to join our growing image analysis facility here at Human Technopole in the beautiful city of Milan, Italy.
#Apply before December 16!

forum.image.sc/t/job-opportun…
Image showing Damian, me (Florian) and Joran during one of our Facility Facilitation Days in my living room. Joran is typically not that grumpy, he simply didn't know this image will ever make it to the internet... ;)
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Craig Russell retweeted
EMBL-EBI Training@EBItraining
11 Nov 2022
Replying to @EBItraining
If it's #microscopy training you're looking for, sign up for alerts on our 2023 course featuring @EMDB_EMPIAR as well as the @BioImageA.

Applications open next week. Run in association with @EoscLife.

➡️ebi.ac.uk/training/event…
VIRTUAL COURSE. Microscopy data analysis: machine learning and the BioImage Archive. 22 - 26 May 2023. Virtual. EMBL-EBI logo.
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Craig Russell retweeted
EMBL-EBI@emblebi
1 Nov 2022
Big congrats to @VirginieUhlmann for being appointed as our Deputy Head of Research! 🎉

Virginie will support the coordination of our research groups, while continuing to lead her own group focusing on bioimage analysis.

ebi.ac.uk/about/news/ann…
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Craig Russell retweeted
Ricardo Henriques@HenriquesLab
12 Sep 2022
🚨💻🔬🤩 #SoftwareEngineers Assemble!!
Looking for 2 #DeepLearning #BioImageAnalysis developers for the #AI4LIFE project. Projects follow the ethos of #ZeroCostDL4Mic, democratizing free access to next-generation imaging technology. Come join us!
euraxess.ec.europa.eu/jobs/835624
Euro-BioImaging ERIC@EuroBioImaging
1 Sep 2022
September 1st is the official start date of the #AI4LIFE project 🙌! We are so excited about this @HorizonEU project to develop cutting-edge services for #AI-driven #imageanalysis. Project kicks off 🚀in Heidelberg in October. Stay tuned!⤵️
eurobioimaging.eu/news/proud-to-…
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Craig Russell retweeted
EMBL-EBI Training@EBItraining
15 Jul 2022
🙋Hands up if you enjoyed a week of @emblebi training!

Thank you to all the organisers, trainers, and trainees that joined us & @TenEnlight for this week's training course on T-Cell immunology.

🔗Further your #bioinformatics knowledge with @EBItraining: ebi.ac.uk/training/live-…
A group of people standing on stone steps with a hand raised in the air each. The words 'Bioinformatics for T-Cell immunology. EMBL-EBI course | 11 – 15 July 2022' are displayed above them with the EMBL-EBI and Enlightten+ logos.
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Craig Russell retweeted
ilastik Team and Anna Kreshuk's Lab@ilastik_team
9 Jun 2022
Replying to @ilastik_team
With all the people tagged above + @martweig, @guijacquemet, @petebankhead, Tom Burke, Lucia Moya-Sans, Cristina de-la-Torre-Gutiérrez, Deborah Schmidt, Maksim Novikov and Dominik Kutra.
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Craig Russell retweeted
ilastik Team and Anna Kreshuk's Lab@ilastik_team
9 Jun 2022
Replying to @ilastik_team
For users and developers of deep learning models in microscopy, we hope to have built a home where such models can be shared and discovered to be run in our desktop and cloud tools. Try it out, give us feedback, join the community!
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Craig Russell retweeted
ilastik Team and Anna Kreshuk's Lab@ilastik_team
9 Jun 2022
Together with the wonderful collaborators and community partners, we are happy to finally present the BioImage Model Zoo at bioimage.io, now described in biorxiv.org/content/10.110….
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Craig Russell retweeted
EMBL-EBI Training@EBItraining
20 May 2022
📸Thanks to this week's #microscopy and #machinelearning course participants!

@VirginieUhlmann, @microRussell, @jrswedlow, @WalczyskoPetr, @gomez_mariscal, @guijacquemet, @martweig, @sohmandal, @awaisathar, @weioyang, @sw644, @BoSoxBioBeth, @SenftRebecca, @bdiazrohrer & more!
A zoom screenshot of 39 people smiling for a picture. The following text is written above them: Microscopy data analysis: machine learning and the BioImage Archive' EMBL-EBI course. 16 - 20 May 2022. The EMBL-EBI and EOSC life logos are also displayed.
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